| Heibong Makhong Upper Primary School | THOUBAL | Primary with Upper Primary | 60 | 30.0:1 |
| Heirok PT. III Upper Primary School | THOUBAL | Primary with Upper Primary | 60 | 8.6:1 |
| Khekman Wangmataba Primary School | THOUBAL | Primary | 60 | 15.0:1 |
| Haoreibi Chandakhong Lower Primary Madrassa | THOUBAL | Primary | 58 | 19.3:1 |
| Okram Upper Primary School | THOUBAL | Primary with Upper Primary | 56 | 7.0:1 |
| Lilong Girl'S H/M Aided | THOUBAL | Pr. Up Pr. and Secondary Only | 54 | 2.8:1 |
| Sapam Maning Leikai Primary School | THOUBAL | Primary | 54 | 5.4:1 |
| Sindam Ideal Institute, Khangabok | THOUBAL | Primary with Upper Primary | 54 | 9.0:1 |
| Madrassa Jamia Khadijatul Kubra | THOUBAL | Primary | 53 | 5.9:1 |
| Amakcham Primary Madrassa | THOUBAL | Primary | 52 | 13.0:1 |
| Mayai Turel Ahanbi Primary Madrassa | THOUBAL | Primary | 52 | 13.0:1 |
| Khekman Boys Primary School | THOUBAL | Primary | 51 | 17.0:1 |
| Leirongthel Upper Primary School | THOUBAL | Primary with Upper Primary | 50 | 25.0:1 |
| Irong Makha Primary Madrassa | THOUBAL | Primary | 48 | 16.0:1 |
| Khongjom Girls P/S (Aided) | THOUBAL | Primary | 47 | 11.8:1 |
| Ningombam Upper Primary School | THOUBAL | Primary with Upper Primary | 47 | 9.4:1 |
| Crescent English H/S | THOUBAL | Pr. Up Pr. and Secondary Only | 46 | 3.5:1 |
| Taibang Maheikol | THOUBAL | Primary | 46 | 4.6:1 |
| Thenden Academy | THOUBAL | Primary | 44 | 4.4:1 |
| Thokchom Junior High School | THOUBAL | Primary with Upper Primary | 44 | 11.0:1 |
| Turel Ahanbi Mathak Lower Primary Madrassa | THOUBAL | Primary | 44 | 14.7:1 |
| Uchiwa Nastao Upper Primary School | THOUBAL | Primary with Upper Primary | 44 | 11.0:1 |
| Irong Chessaba Upper Primary School | THOUBAL | Primary with Upper Primary | 43 | 8.6:1 |
| Nastao Waikou Mapal LPM(Aided) | THOUBAL | Primary | 43 | 14.3:1 |
| Sapam Primary School | THOUBAL | Primary | 43 | 21.5:1 |
| Singa Bishnunaha Upper Primary School | THOUBAL | Primary with Upper Primary | 43 | 10.8:1 |
| New Model Higher Secondary School, Moijing, Thoubal | THOUBAL | Higher Secondary only/Jr. College | 42 | 2.8:1 |
| Pulleipokpi Tentha Khunou PS | THOUBAL | Primary | 41 | 13.7:1 |
| Chingjao Mayai Lower Primary Madrassa | THOUBAL | Primary | 40 | 10.0:1 |
| Rafiuddin PM | THOUBAL | Primary | 40 | 6.7:1 |
| Haoreibi Makha Leikai Primary Madrassa | THOUBAL | Primary | 38 | 7.6:1 |
| Irong Mayai Leikai Primary Madrassa | THOUBAL | Primary | 38 | 9.5:1 |
| Pujari High School, Khangabok | THOUBAL | Pr. Up Pr. and Secondary Only | 38 | 3.8:1 |
| Amtola Girl'S LPM Aided | THOUBAL | Primary | 37 | 18.5:1 |
| Heiningsoi Primary School | THOUBAL | Primary | 37 | 18.5:1 |
| Lamding Cherapur Upper Primary School | THOUBAL | Primary with Upper Primary | 37 | 9.3:1 |
| Leihaokhong Primary Madrassa | THOUBAL | Primary | 37 | 9.3:1 |
| Kekru Govt. Primary School | THOUBAL | Primary | 36 | 6.0:1 |
| Moirang Sangol I T.M.T. LPM( Aided) | THOUBAL | Primary | 36 | 18.0:1 |
| Nungei Lower Primary Madrassa | THOUBAL | Primary | 36 | 18.0:1 |
| Haoreibi Lou-Manga Lower Primary Madrassa | THOUBAL | Primary | 35 | 11.7:1 |
| Irong Khundon Part-II Leikai Primary School | THOUBAL | Primary | 35 | 17.5:1 |
| Maibam Konjil Primary School | THOUBAL | Primary | 35 | 17.5:1 |
| Ningombam JR. H/S (Aided) | THOUBAL | Primary with Upper Primary | 35 | 5.8:1 |
| Turel Ahanbi Mayai Primary Madrassa | THOUBAL | Primary | 35 | 8.8:1 |
| Waithou Mapal Junior High School | THOUBAL | Primary with Upper Primary | 35 | 7.0:1 |
| Heirok Litan P/S | THOUBAL | Primary | 34 | 11.3:1 |
| Kangyambem Upper Primary School | THOUBAL | Primary with Upper Primary | 34 | 8.5:1 |
| Khangabok Maisanam Balika Lower Primary School | THOUBAL | Primary | 34 | 17.0:1 |
| Langthabal Khunou Primary School | THOUBAL | Primary | 34 | 17.0:1 |
| Irong Chesaba Junior High School Aided | THOUBAL | Upper Primary only | 33 | 8.3:1 |
| Paona Memorial LPS(Aided) | THOUBAL | Primary | 33 | 16.5:1 |
| Phouden Upper Primary School | THOUBAL | Primary with Upper Primary | 33 | 4.1:1 |
| Shikhong Khunou Hijam Khunou Primary School | THOUBAL | Primary | 33 | 5.5:1 |
| Oinam Sawombung Lairenbi LP (A | THOUBAL | Primary | 32 | 16.0:1 |
| Khomdram Leirak LPS Aided | THOUBAL | Primary | 31 | 10.3:1 |
| Khongnangpal Primary Madrassa | THOUBAL | Primary | 31 | 10.3:1 |
| Leirongthel Pitra Primary School | THOUBAL | Primary | 31 | 15.5:1 |
| Nungei Khunou Vellage Dolaithabi Primary School | THOUBAL | Primary | 31 | 15.5:1 |
| Tentha Marongband Upper Primary School | THOUBAL | Primary with Upper Primary | 31 | 15.5:1 |